Event

Recruit

Collabo

Software Tools

Databases

Contact Us






Software tools
GeneDecoder GeneDecoder
Gene Finding System for Eukaryotes, based on HMMs
[URL] http://www.genedecoder.org/
Scarna SCARNA
Stem Candidate Aligner for RNA
[URL] http://www.scarna.org/
ALN
Pairwase alignment of biological sequences supporting spliced alignment procedures.
[URL] http://www.cbrc.jp/ALN/
FORTE
a profile-profile comparison tool for protein fold recognition
[URL] http://www.cbrc.jp/forte/
POODLE POODLE
Prediction of Order and disorder by machine learning
[URL] http://mbs.cbrc.jp/poodle/
TMBETA TMBETA-NET
Prediction of Membrane Spanning b-Strand Segments in Outer Membrane Proteins
[URL] http://psfs.cbrc.jp/tmbeta-net/
IMG:WoLF PSORT WoLF PSORT
Protein Sub-cellular Localization System
[URL] http://wolfpsort.cbrc.jp/
GRIFFIN
G-protein and receptor interaction feature finding instrument
[URL] http://griffin.cbrc.jp/
Papia Papia
Protein Information Analysis System
[URL] http://mbs.cbrc.jp/papia/
PiKA2 PiKA2
Web based computing environment which deals with the complicated protein 2D-PAGE images
[URL] http://www.bio-image.org/pika2/
CoCoozo CoCoozo
Parallel high-speed engine for peptide MS/MS ions search
[URL] http://www.cbrc.jp/cocoozo/
SGCAL (Structural Glycomics Caluculation) SGCAL
Structural Glycomics Calculation
[URL] http://sgcal.cbrc.jp/
DNAinsight DNAinsight
Web based computing environment which deals with the image processing of the complicated 2-D gel electrophoretograms of genomic DNA
[URL] http://www.bio-image.org/DNAinsight/
CellMontage Cell Montage
Cell function analysis system by gene expression profile matching
[URL] http://cellmontage.cbrc.jp/
ASIAN(Automatic System for Inferring A Network) ASIAN
Network inference tool by the combination of hierarchical clustering and graphical Gaussian modeling (GGM)
[URL] http://eureka.cbrc.jp/asian/

Databases
ASTRA ASTRA
Alternative Splicing and TRanscription Archives
[URL] http://alterna.cbrc.jp/
SEVENS SEVENS
Comprehensive Collection of Human 7TM Receptors
[URL] http://sevens.cbrc.jp/
GENIUS II GENIUS II
Database System for Assigning Genome ORFs to 2D structures
[URL] http://genius.cbrc.jp/
PDB-REPRDB PDB-REPRDB
Database of Representative Protein Chains from Protein Data Bank
[URL] http://mbs.cbrc.jp/pdbreprdb/
DB-SPIRE DB-SPIRE
Database for Structure-based Protein Interaction Research
[URL] http://mbs.cbrc.jp/DB-SPIRE/
EzCatDB EzCatDB
A database of Enzyme Catalytic Mechanisms
[URL] http://mbs.cbrc.jp/EzCatDB/
ARM ARM
Atomic Reconstruction of Metabolism
[URL] http://www.metabolome.jp/
INOH INOH
An Event-oriented pathway database
[URL] http://www.inoh.org/


 

mail

© Computational Biology Research Center, AIST, 2001-2006 All Rights Reserved.
Sitepolicy |