▼Demonstrations
P1 "Data Mining of Supersecondary Structure in Protein"
"タンパク質超二次構造のデータマイニング解析"
Hiroshi IZUMI, Akihiro WAKISAKA, Laurence A. NAFIE, Rina K. DUKOR
P2 "Development of software to support protein experiments"
Tamotsu Noguchi, Kana Shimizu, Satoru Kanai, Shuichi Hirose
P3 "Gaussian mixture model-based multiple object tracking for analysis of animal social behaviors."
Tsukasa Fukunaga, Wataru Iwasaki

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▼Posters
sequence analysis & genomics
P4 "Developing a novel amino acid substitution matrix suitable for detecting distantly related proteins"
Kazunori YAMADA, Kentaro TOMII
P5 "Bisulfighter: accurate detection of methylated cytosines and differentially methylated regions"
Yutaka Saito, Junko Tsuji, Toutai Mituyama
P6 "An algorithm for designing DNA sequence in protein coding regions"
Goro Terai, Satoshi Kamegai, Kiyoshi Asai
P7 "Finding 3D co-localization of genomic elements from HiC data"
Yutaka Saito, Toutai Mituyama
P8 "Improved prediction of mitochondrial presequence and cleavage site"
Kenichiro Imai, Yoshinori Fukasawa, Kentaro Tomii, Paul Horton
P9 "Kingdom-wide prediction of cytochrome P450 genes by Famaln"
Mariko Morita, Osamu Gotoh
P10 "Single-cell RNA-seq analysis of human iPS and ES cells"
Junko YAMANE, Michihiro TANAKA, Wataru FUJIBUCHI
P11 "Recent progress of RNA secondary structure predictions"
Michiaki Hamada
P12 "Draft assembly of the marine pennate diatom, Fistulifera sp. strain JPCC DA0580 genome reveals the chromosomal evidence for allopolyploidy in genome structure"
Michihiro Tanaka, Pui Shan Wong, Sachiyo Aburatani, Yoshihiko Sunaga, Masaki Muto, Masayoshi Tanaka, Michiko Nemoto, Takeaki Taniguchi, Mitsufumi Matsumoto, Tomoko Yoshino, Tsuyoshi Tanaka, Wataru Fujibuchi
P13 "Inferring constraints on amino acids from protein sequence alignment"
Kentaro HAMADA, Michiaki HAMADA, Kiyoshi ASAI
P14 "A fast and exact calculation for various score distributions of RNA secondary structure"
Ryota Mori, Michiaki Hamada, Kiyoshi Asai
P15 "A Memory Efficient and Fast-Constructed Algorithm for Massive Short Sequence Indexing"
Chen-Hua LU, Che-Rung LEE
P16 "Reducing the memory required for constructing suffix arrays for spaced and subset seed queries."
Anish Man Singh Shrestha
P17 "Detection of homologous regions using higher order hidden markov models"
Thomas M. Poulsen, Martin C. Frith, and Paul Horton
P18 "SeqAn - The C++ library for sequence analysis"
Sascha Meiers, David Weese, Martin Frith, Knut Reinert
P19 "Discovering Combinatorial Interactions in Survival Data"
David A. duVerle, Ichiro Takeuchi and Koji Tsuda

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protein & biomolecules (function & structure)
P20 "Identifying Molecular Recognition Features in Disordered Proteins"
Chun Fang, Tamotsu Noguchi, Hayato Yamana
P21 "The 3D structure prediction of Protein and RNA complex"
Junichi Iwakiri, Michiaki Hamada, Kiyoshi Asai, Tomoshi Kameda
P22 "Random matrix refinment of principal component analysis of MD simulation of protein"
Masanori Yamanaka
P23 "RNA inverse folding for multiple target secondary structures"
A. Taneda
P24 "Improving prediction of Caspase-3 substrates by using experimentally verified non-cleavage sites"
Szu-Chin FU, Kenichiro IMAI, Kentaro TOMII
P25 "Software Development for the Structure Based Modeling of Protein Interactions and Movements"
Yutaka Ueno, Shuntaro Ito
P26 "Signal propagation pathway and interaction with G protein in bovine opsin"
Minoru Sugihara, Makiko Suwa, Ana-Nicoleta Bondar

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cellular system & bioprocess
P27 "Inference of Gene Regulatory Network for Kojic Acid Biosynthesis in A.oryzae"
Sachiyo Aburatani, Myco Umemura, Nozomi Nagano, Kentaro Tomii, Kiyoshi Asai, Masayuki Machida
P28 "Pathway analysis on Fistulifera diatom to explore triacylglycerol metabolism"
Pui Shan Wong, Michihiro Tanaka, Yoshihiko Sunaga, Masayoshi Tanaka, Takeaki Taniguchi, Tomoko Yoshino, Tsuyoshi Tanaka, Sachiyo Aburatani, Wataru Fujibuchi
P29 "Dynamic Changes of Regulatory Intensities in the Mouse Circadian Rhythm Gene Network"
Daisuke Tominaga
P30 "Automatic Estimation of Transcriptional Regulation of Budding Yeast by a Machine Learning Method"
Shohei MARUYAMA, Sachiyo ABURATANI, Yasuo MATSUYAMA

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chemoinformatics & drug design
P31 "An efficient privacy-preserving similarity search protocol for chemical compound databases"
Kana Shimizu, Koji Nuida, Hiromi Arai, Shigeo Mitsunari, Michiaki Hamada, Koji Tsuda, Jun Sakuma, Takatsugu Hirokawa, Goichiro Hanaoka, Kiyoshi Asai
P32 "Predicting drug-disease association network toward drug repositioning"
Hiroaki Iwata, Minako Yoshihara, Yoshihiro Yamanishi

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databases，ontology & text mining
P33 "Analyses of enzyme structures and functions"
Nozomi NAGANO, Tsuyoshi KATO, Naoko NAKAYAMA
P34 "BioAssay Ontology: a tool for enabling robust annotation and description of diverse biological screening assays"
Kunie Sakurai, Uma D. Vempati, Stephan C. Schurer, and Vance P. Lemmon

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others
P35 "Morphology-based non-invasive evaluation of siRNA effects"
Hiroto SASAKI, Kazuhiro MUKAIYAMA, Kei KANIE, Wakana YAMAMOTO, Yasujiro KIYOTA, Hiroyuki HONDA, Ryuji KATO
P36 "Identification of MicroRNA Biomarkers for the Prediction of Adverse Reactions to Immunization"
Bahtiyor Nosirov, Shunsuke Teraguchi, Alexis Vandenbon, Edward Wijaya, Yoriko Suenari, Daron Standley

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