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  • Event¡Ê2011¡Ë

Event¡Ê2011¡Ë

2011
DateEventparticipant (CBRC)
1/24-27 BiWO2011
7/17 - 19 ISMB/ECCB2011 Kiyoshi Asai
Paul Horton
Kentaro Tomii
Chie Motono
Kazutaka Katoh
Kana Shimizu
Junichi Ito
6/29 - 7/1 10th International BIO Expo Kiyoshi Asai
Katsuhisa Horiomoto
Takatsugu Hirokawa

BiWO2011
BioInformatics Week In Odaiba

Date ¡§ Jan 24(Tue)¡Á27(Fri)
Venue ¡§ Computational Biology Research Center(CBRC), AIST
Access¡§http://www.cbrc.jp/ja/map.eng.html
Detail ¡§ Official HP¡§http://www.cbrc.jp/biwo2011/index_en.html

ISMB/ECCB2011

19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology
Date ¡§ SIGs and Tutorials Friday, July 15 - Saturday, July 16
Conference Sunday, July 17 - Tuesday, July 19
Venue ¡§ AUSTRIA CENTER VIENNA, Wien, Austria.
Detail ¡§ http://www.iscb.org/ismbeccb2011
  • CBRC will become an exhibitor of the 19th Annual International Conference on Intelligent Systems for Molecular Biology and th 10th European Conference on Computational Biology (ISMB/ECCB2010) during July 17- July 19.¡¡Several CBRC scientists will present their latest works in oral and poster presentations.¡¡Please enjoy lively discussion with numerous other participants.

  • CBRC and Collaborators' Oral Presentations
  • Highlights Track: HL15 Monday, July 18: 12:15 p.m. - 12:40 p.m.
    "SlideSort: Fast and exact algorithm for Next Generation Sequencing data analysis"

    Presenting author: Kana Shimizu, CBRC, AIST, Japan
    Additional author: Koji Tsuda, CBRC, AIST, Japan

  • Highlights Track: HL24 Monday, July 18: 4:00 p.m. - 4:25 p.m.
    "Next-generation genome alignment with LAST"

    Presenting author:
    Paul Horton, CBRC, AIST, Japan
    Additional authors:
    Martin Frith, CBRC, AIST, Japan
    Raymond Wan, CBRC, AIST, Japan (Current affiliation: The University of Tokyo, Japan); (Collaborator of CBRC)
    Kengo Sato, The University of Tokyo, Japan (Collaborator of CBRC)
    Szymon Kielbasa, Max Planck Institute for Molecular Genetics, Japan

  • Proceedings Track: PT04 Sunday, July 17: 11:15 a.m. - 11:40 a.m.
    "IPknot: fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming"

    Presenting author:
    Kengo Sato, University of Tokyo, Japan (Collaborator of CBRC)
    Additional authors:
    Yuki Kato, Nara Institute of Science and Technology, Japan
    Michiaki Hamada, University of Tokyo, Japan (Collaborator of CBRC)
    Tatsuya Akutsu, Kyoto University, Japan
    Kiyoshi Asai, University of Tokyo, Japan (Director, CBRC)


  • CBRC and Collaborators' Poster Presentations
  • For Odd numbered posters: Monday, July 18: 12:40 p.m.-2:30 p.m.
    For Even numbered posters: Tuesday, July 19: 12:40 p.m.-2:30 p.m.
  • Poster L20
    A novel ultra-fast comparison method for known and potential ligand-binding sites of proteins
    Presenting author:
    Kentaro Tomii, CBRC, AIST, Japan
    Additional authors:
    Jun-ichi Ito, The University of Tokyo, Japan (Collaborator of CBRC)
    Yasuo Tabei, ERATO, JST, Japan
    Kana Shimizu, CBRC, AIST, Japan
    Koji Tsuda, CBRC, AIST, Japan

  • Poster U24
    fastapl -- a utility for versatile and easy processing of multifasta format data
    Presenting author:
    Paul Horton, CBRC, AIST, Japan

  • Poster U55
    SlideSort: Fast and exact algorithm for Next Generation Sequencing data analysis
    Presenting author:
    Kana Shimizu, CBRC, AIST, Japan
    Additional authors:
    Koji Tsuda, CBRC, AIST, Japan

  • Poster U63
    Effect of adding homologs in multiple sequence alignment and phylogenetic analysis
    Presenting author:
    Kazutaka Katoh, CBRC, AIST, Japan
    Additional authors:
    Christian Ledergerber (ETH Zurich, Computer Science); Christophe Dessimoz (ETH Zurich, Computer Science); Manuel Gil (ETH Zurich, Computer Science)

  • Poster W66
    SAHG, a comprehensive database of annotated structure models for human proteins
    Presenting author:
    Chie Motono, CBRC, AIST, Japan
    Additional authors:
    Ryotaro Koike (Nagoya University); Kana Shimizu (CBRC, AIST); Matsuyuki Shirota (Tohoku University); Takayuki Amemiya (Nagoya University); Kentaro Tomii (CBRC, AIST); Nozomi Nagano (CBRC, AIST); Hidekazu Hiroaki (Kobe University); Tsuyoshi Shirai (Nagahama Institute of Bioscience and Technology); Kengo Kinoshita (Tohoku University); Tamotsu Noguchi (CBRC,AIST); Motonori Ota (Nagoya University)

  • CBRC Exhibitor Booth
  • Booth Number: No. 29
  • Details: TBA
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10th International BIO Expo
BIO ACADEMIC FORUM

Date ¡§ Wednesday, June 29 - Friday, July 2
Venue ¡§ Tokyo Bigsight, Japan
Host ¡§ Reed Exhibitions Japan Ltd.
Detail & Contact ¡§ Special CBRC webpage
http://www.cbrc.jp/bioexpo/
BIO ACADEMIC FORUM
http://www.academia.bio-expo.jp/en/Home/
  • ¡¡The AIST will host a pavilion at the 10th annual International Bio EXPO on June 29- July 1 at Tokyo Big Site.¡¡Three CBRC scientists will present their latest work in oral and poster presentations.¡¡Please enjoy lively discussion with numerous other participant.

  • CBRC Presentations
  • Wednesday, June 29
  • 12:50-13:20¡¡¡ÚACA-2¡Û
    Title: "Development and application of object-oriented computational methods by systems biology approach"
    Katsuhisa Horimoto¡ÊTeam Leader, Biological Network Team¡Ë
    Booth Number: L-08
  • 16:10-16:40¡¡¡ÚACA-2¡Û
    Title: "The Computational Biology Research Center (CBRC) and its activity on human resources fostering"
    Kiyoshi Asai¡ÊDirector¡Ë
    Booth Number: L-07
  • Friday, July 1
  • 14:10-14:40¡¡¡ÚACA-2¡Û
    Title: "In silico protein structure-based drug discovery and design"
    Takatsugu Hirokawa¡ÊTeam Leader, Molecular Modeling and Drug Design Team¡Ë
    Booth Number: L-09
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