Computational Biology Research Center[CBRC]

BiWO2011
BioInformatics Week In Odaiba

ISMB/ECCB2011

• CBRC will become an exhibitor of the 19th Annual International Conference on Intelligent Systems for Molecular Biology and th 10th European Conference on Computational Biology (ISMB/ECCB2010) during July 17- July 19.　Several CBRC scientists will present their latest works in oral and poster presentations.　Please enjoy lively discussion with numerous other participants.


• CBRC and Collaborators' Oral Presentations
• Highlights Track: HL15 Monday, July 18: 12:15 p.m. - 12:40 p.m.
  "SlideSort: Fast and exact algorithm for Next Generation Sequencing data analysis"
  Presenting author: Kana Shimizu, CBRC, AIST, Japan
  Additional author: Koji Tsuda, CBRC, AIST, Japan
  
  
• Highlights Track: HL24 Monday, July 18: 4:00 p.m. - 4:25 p.m.
  "Next-generation genome alignment with LAST"
  Presenting author:
  Paul Horton, CBRC, AIST, Japan
  Additional authors:
  Martin Frith, CBRC, AIST, Japan
  Raymond Wan, CBRC, AIST, Japan (Current affiliation: The University of Tokyo, Japan); (Collaborator of CBRC)
  Kengo Sato, The University of Tokyo, Japan (Collaborator of CBRC)
  Szymon Kielbasa, Max Planck Institute for Molecular Genetics, Japan
  
  
• Proceedings Track: PT04 Sunday, July 17: 11:15 a.m. - 11:40 a.m.
  "IPknot: fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming"
  Presenting author:
  Kengo Sato, University of Tokyo, Japan (Collaborator of CBRC)
  Additional authors:
  Yuki Kato, Nara Institute of Science and Technology, Japan
  Michiaki Hamada, University of Tokyo, Japan (Collaborator of CBRC)
  Tatsuya Akutsu, Kyoto University, Japan
  Kiyoshi Asai, University of Tokyo, Japan (Director, CBRC)
  
  
  
• CBRC and Collaborators' Poster Presentations
• For Odd numbered posters: Monday, July 18: 12:40 p.m.-2:30 p.m.
  For Even numbered posters: Tuesday, July 19: 12:40 p.m.-2:30 p.m.
• Poster L20
  A novel ultra-fast comparison method for known and potential ligand-binding sites of proteins
  Presenting author:
  Kentaro Tomii, CBRC, AIST, Japan
  Additional authors:
  Jun-ichi Ito, The University of Tokyo, Japan (Collaborator of CBRC)
  Yasuo Tabei, ERATO, JST, Japan
  Kana Shimizu, CBRC, AIST, Japan
  Koji Tsuda, CBRC, AIST, Japan
  
  
• Poster U24
  fastapl -- a utility for versatile and easy processing of multifasta format data
  Presenting author:
  Paul Horton, CBRC, AIST, Japan
  
  
• Poster U55
  SlideSort: Fast and exact algorithm for Next Generation Sequencing data analysis
  Presenting author:
  Kana Shimizu, CBRC, AIST, Japan
  Additional authors:
  Koji Tsuda, CBRC, AIST, Japan
  
  
• Poster U63
  Effect of adding homologs in multiple sequence alignment and phylogenetic analysis
  Presenting author:
  Kazutaka Katoh, CBRC, AIST, Japan
  Additional authors:
  Christian Ledergerber (ETH Zurich, Computer Science); Christophe Dessimoz (ETH Zurich, Computer Science); Manuel Gil (ETH Zurich, Computer Science)
  
  
• Poster W66
  SAHG, a comprehensive database of annotated structure models for human proteins
  Presenting author:
  Chie Motono, CBRC, AIST, Japan
  Additional authors:
  Ryotaro Koike (Nagoya University); Kana Shimizu (CBRC, AIST); Matsuyuki Shirota (Tohoku University); Takayuki Amemiya (Nagoya University); Kentaro Tomii (CBRC, AIST); Nozomi Nagano (CBRC, AIST); Hidekazu Hiroaki (Kobe University); Tsuyoshi Shirai (Nagahama Institute of Bioscience and Technology); Kengo Kinoshita (Tohoku University); Tamotsu Noguchi (CBRC,AIST); Motonori Ota (Nagoya University)
  
  
• CBRC Exhibitor Booth
• Booth Number: No. 29
• Details: TBA

10th International BIO Expo
BIO ACADEMIC FORUM

• 　The AIST will host a pavilion at the 10th annual International Bio EXPO on June 29- July 1 at Tokyo Big Site.　Three CBRC scientists will present their latest work in oral and poster presentations.　Please enjoy lively discussion with numerous other participant.


• CBRC Presentations
• Wednesday, June 29
• 12:50-13:20　【ACA-2】
  Title: "Development and application of object-oriented computational methods by systems biology approach"
  Katsuhisa Horimoto（Team Leader, Biological Network Team）
  Booth Number: L-08
• 16:10-16:40　【ACA-2】
  Title: "The Computational Biology Research Center (CBRC) and its activity on human resources fostering"
  Kiyoshi Asai（Director）
  Booth Number: L-07
• Friday, July 1
• 14:10-14:40　【ACA-2】
  Title: "In silico protein structure-based drug discovery and design"
  Takatsugu Hirokawa（Team Leader, Molecular Modeling and Drug Design Team）
  Booth Number: L-09